EXPath 2.0

ITAG Tomato ID

Solyc01g005560.2.1 [Go To ITAG tomato]

Description

Isocitrate dehydrogenase (D2D324_GOSHI)

chromosome/scaffold

chr01

GPL4741 Probe ID

Les.3311.3.S1_at;Les.3311.1.S1_at;Les.3311.2.S1_at

Sequence

Solyc01g005560.2.1

1248 n.t.(cDNA)

415 a.a.(protein)

Pfam

Accession

Type

Description

PF00180
[Go To pfam]

Domain

Isocitrate/isopropylmalate dehydrogenase

KEGG ortholog

Name

Definition

Annotated transcript

K00031
[Go To KEGG]

IDH1, IDH2, icd

isocitrate dehydrogenase [EC:1.1.1.42]

101268602

Mapping your query gene to KEGG pathways:

ID	Description
map00020	Citrate cycle (TCA cycle)	GO TO Pathway
map00480	Glutathione metabolism	GO TO Pathway
map01100	Metabolic pathways	GO TO Pathway
map01110	Biosynthesis of secondary metabolites	GO TO Pathway
map01200	Carbon metabolism	GO TO Pathway
map01210	2-Oxocarboxylic acid metabolism	GO TO Pathway
map01230	Biosynthesis of amino acids	GO TO Pathway
map04146	Peroxisome	GO TO Pathway

GO category	GO ID	GO term
Biological process
	GO:0055114 [Go To GO]	oxidation-reduction process
	GO:0006099 [Go To GO]	tricarboxylic acid cycle
	GO:0006102 [Go To GO]	isocitrate metabolic process
Molecular function
	GO:0000287 [Go To GO]	magnesium ion binding
	GO:0016491 [Go To GO]	oxidoreductase activity
	GO:0016616 [Go To GO]	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
	GO:0051287 [Go To GO]	NAD binding
	GO:0004450 [Go To GO]	isocitrate dehydrogenase (NADP+) activity
	GO:0046872 [Go To GO]	metal ion binding

You can also search for microarray expression levels in specified conditions or start a co-expression analysis: