E-mail:sarah321@mail.ncku.edu.tw
Comparative expression analysis inferring metabolic pathways for plants
| MTGD ID | Medtr0002s0760 [Go To MTGD] | |||||||||||
| Description | ||||||||||||
| DNA-directed RNA polymerase subunit alpha | ||||||||||||
| chromosome/scaffold | scaffold0002 | |||||||||||
| Sequence | ||||||||||||
| Medtr0002s0760.1 | 1338 n.t.(cDNA) | 446 a.a.(protein) | ||||||||||
| Pfam | Accession | Type | Description | |||||||||
| PF00411 [Go To pfam] | Family | Ribosomal protein S11 | ||||||||||
| PF01000 [Go To pfam] | Domain | RNA polymerase Rpb3/RpoA insert domain | ||||||||||
| PF01193 [Go To pfam] | Domain | RNA polymerase Rpb3/Rpb11 dimerisation domain | ||||||||||
| PF03118 [Go To pfam] | Domain | Bacterial RNA polymerase, alpha chain C terminal domain | ||||||||||
| KEGG ortholog | ID | Name | Definition | Annotated transcript | ||||||||
| K03040 [Go To KEGG] |
rpoA | DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] | MTR_0002s0760 | |||||||||
| ID | Description | |
| map00230 | Purine metabolism | GO TO Pathway |
| map00240 | Pyrimidine metabolism | GO TO Pathway |
| map01100 | Metabolic pathways | GO TO Pathway |
| map03020 | RNA polymerase | GO TO Pathway |
| GO category | GO ID | GO term |
| Biological process | ||
| GO:0006351 [Go To GO] | transcription, DNA-templated | |
| GO:0006412 [Go To GO] | translation | |
| Molecular function | ||
| GO:0003677 [Go To GO] | DNA binding | |
| GO:0003735 [Go To GO] | structural constituent of ribosome | |
| GO:0003899 [Go To GO] | DNA-directed RNA polymerase activity | |
| GO:0046983 [Go To GO] | protein dimerization activity | |
| Cellular component | ||
| GO:0005622 [Go To GO] | intracellular | |
| GO:0005840 [Go To GO] | ribosome |
E-mail:sarah321@mail.ncku.edu.tw