Gene informations

MaizeGDB ID GRMZM2G313678 [Go To MaizeGDB]
Description
Elongation factor Tu [GRMZM2G313678_T03]
Elongation factor Tu [GRMZM2G313678_T02]
Elongation factor Tu [GRMZM2G313678_T01]
chromosome/scaffold 5
Sequence
GRMZM2G313678_T01   1870   n.t.(cDNA)
   450   a.a.(protein)
GRMZM2G313678_T02   1796   n.t.(cDNA)
   423   a.a.(protein)
GRMZM2G313678_T03   2100   n.t.(cDNA)
   287   a.a.(protein)
Pfam Accession Type Description Annotated transcript
PF03144
[Go To pfam]
Domain
Elongation factor Tu domain 2GRMZM2G313678_T03,GRMZM2G313678_T02,GRMZM2G313678_T01
PF00009
[Go To pfam]
Domain
Elongation factor Tu GTP binding domainGRMZM2G313678_T03,GRMZM2G313678_T02,GRMZM2G313678_T01
PF03143
[Go To pfam]
Domain
Elongation factor Tu C-terminal domainGRMZM2G313678_T03,GRMZM2G313678_T02,GRMZM2G313678_T01
KEGG ortholog ID Name Definition Annotated transcript
K02358
[Go To KEGG]		 tuf, TUFM elongation factor Tu 100194026


     Mapping your query gene to KEGG pathways:

ID Description
map04626 Plant-pathogen interaction GO TO Pathway


     Gene Ontology:

GO category GO ID GO term
Biological process
GO:0006184 [Go To GO] GTP catabolic process
GO:0006412 [Go To GO] translation
GO:0006414 [Go To GO] translational elongation
GO:0008150 [Go To GO] biological_process
GO:0009056 [Go To GO] catabolic process
GO:0009058 [Go To GO] biosynthetic process
GO:0034641 [Go To GO] cellular nitrogen compound metabolic process
GO:0034655 [Go To GO] nucleobase-containing compound catabolic process
GO:0044281 [Go To GO] small molecule metabolic process
GO:0046686 [Go To GO] response to cadmium ion
Molecular function
GO:0000166 [Go To GO] nucleotide binding
GO:0003674 [Go To GO] molecular_function
GO:0003723 [Go To GO] RNA binding
GO:0003746 [Go To GO] translation elongation factor activity
GO:0003924 [Go To GO] GTPase activity
GO:0005524 [Go To GO] ATP binding
GO:0005525 [Go To GO] GTP binding
GO:0008135 [Go To GO] translation factor activity, nucleic acid binding
GO:0008270 [Go To GO] zinc ion binding
GO:0043167 [Go To GO] ion binding
GO:0050897 [Go To GO] cobalt ion binding
Cellular component
GO:0005575 [Go To GO] cellular_component
GO:0005618 [Go To GO] cell wall
GO:0005622 [Go To GO] intracellular
GO:0005623 [Go To GO] cell
GO:0005737 [Go To GO] cytoplasm
GO:0005739 [Go To GO] mitochondrion
GO:0030312 [Go To GO] external encapsulating structure
GO:0043226 [Go To GO] organelle


You can also search for RNA-seq expression levels in specified conditions or start a co-expression analysis:

RNA-seq Expression Search

Co-expression Analysis


Contact us:Wen-Chi Chang          E-mail:sarah321@mail.ncku.edu.tw