EXPath 2.0

MaizeGDB ID

GRMZM2G144196 [Go To MaizeGDB]

Description

SIGMA70-like transcription factor

Uncharacterized protein [GRMZM2G144196_T03]

SIGMA70-like transcription factor

Uncharacterized protein [GRMZM2G144196_T02]

SIGMA70-like transcription factor

Uncharacterized protein [GRMZM2G144196_T01]

chromosome/scaffold

Sequence

GRMZM2G144196_T01

2172 n.t.(cDNA)

292 a.a.(protein)

GRMZM2G144196_T02

2080 n.t.(cDNA)

542 a.a.(protein)

GRMZM2G144196_T03

2077 n.t.(cDNA)

541 a.a.(protein)

Pfam

Accession

Type

Description

Annotated transcript

PF04542
[Go To pfam]

Domain

Sigma-70 region 2

GRMZM2G144196_T03,GRMZM2G144196_T02,GRMZM2G144196_T01

PF04545
[Go To pfam]

Domain

Sigma-70, region 4

GRMZM2G144196_T03,GRMZM2G144196_T02,GRMZM2G144196_T01

PF04539
[Go To pfam]

Family

Sigma-70 region 3

GRMZM2G144196_T03,GRMZM2G144196_T02,GRMZM2G144196_T01

Gene Ontology:

GO category	GO ID	GO term
Biological process
	GO:0006352 [Go To GO]	DNA-templated transcription, initiation
	GO:0006355 [Go To GO]	regulation of transcription, DNA-templated
	GO:0008150 [Go To GO]	biological_process
	GO:0009058 [Go To GO]	biosynthetic process
	GO:0034641 [Go To GO]	cellular nitrogen compound metabolic process
	GO:0045893 [Go To GO]	positive regulation of transcription, DNA-templated
	GO:0071482 [Go To GO]	cellular response to light stimulus
	GO:0071483 [Go To GO]	cellular response to blue light
	GO:0090351 [Go To GO]	seedling development
Molecular function
	GO:0000988 [Go To GO]	protein binding transcription factor activity
	GO:0001053 [Go To GO]	plastid sigma factor activity
	GO:0001071 [Go To GO]	nucleic acid binding transcription factor activity
	GO:0003674 [Go To GO]	molecular_function
	GO:0003677 [Go To GO]	DNA binding
	GO:0003700 [Go To GO]	sequence-specific DNA binding transcription factor activity
	GO:0016987 [Go To GO]	sigma factor activity

You can also search for RNA-seq expression levels in specified conditions or start a co-expression analysis:

RNA-seq Expression Search

Co-expression Analysis