Gene informations

TAIR ID AT5G01530 [Go To TAIR]
Gene symbol LHCB4.1
Description light harvesting complex photosystem II
Probe ID 251082_at [Go To GEO Profile]
Sequence
AT5G01530.11222   n.t.(cDNA)
290   a.a.(protein)
Pfam Accession Type Description
PF00504
[Go To pfam]
Family
Chlorophyll A-B binding protein
KEGG ortholog ID Name Definition
K08915
[Go To KEGG]
LHCB4 light-harvesting complex II chlorophyll a/b binding protein 4


     Mapping your query gene to KEGG pathways:

ID Description
map00196 Photosynthesis - antenna proteins GO TO Pathway
map01100 Metabolic pathways GO TO Pathway


     Gene Ontology:

GO category GO ID GO term
Biological process
GO:0006091 [Go To GO] generation of precursor metabolites and energy
GO:0006364 [Go To GO] rRNA processing
GO:0006464 [Go To GO] cellular protein modification process
GO:0008150 [Go To GO] biological_process
GO:0009637 [Go To GO] response to blue light
GO:0009644 [Go To GO] response to high light intensity
GO:0009744 [Go To GO] response to sucrose
GO:0009765 [Go To GO] photosynthesis, light harvesting
GO:0010114 [Go To GO] response to red light
GO:0010155 [Go To GO] regulation of proton transport
GO:0010218 [Go To GO] response to far red light
GO:0015979 [Go To GO] photosynthesis
GO:0018298 [Go To GO] protein-chromophore linkage
GO:0019684 [Go To GO] photosynthesis, light reaction
GO:0034641 [Go To GO] cellular nitrogen compound metabolic process
GO:0042254 [Go To GO] ribosome biogenesis
Molecular function
GO:0003674 [Go To GO] molecular_function
GO:0016168 [Go To GO] chlorophyll binding
GO:0043167 [Go To GO] ion binding
GO:0046872 [Go To GO] metal ion binding
Cellular component
GO:0005575 [Go To GO] cellular_component
GO:0005622 [Go To GO] intracellular
GO:0005623 [Go To GO] cell
GO:0005737 [Go To GO] cytoplasm
GO:0009507 [Go To GO] chloroplast
GO:0009522 [Go To GO] photosystem I
GO:0009523 [Go To GO] photosystem II
GO:0009534 [Go To GO] chloroplast thylakoid
GO:0009535 [Go To GO] chloroplast thylakoid membrane
GO:0009536 [Go To GO] plastid
GO:0009579 [Go To GO] thylakoid
GO:0010287 [Go To GO] plastoglobule
GO:0016020 [Go To GO] membrane
GO:0016021 [Go To GO] integral component of membrane
GO:0043226 [Go To GO] organelle
GO:0043234 [Go To GO] protein complex


You can also search for microarray expression levels in specified conditions or start a co-expression analysis:


Contact us:Wen-Chi Chang          E-mail:sarah321@mail.ncku.edu.tw