Tanscript informations

ITAG Tomato ID    Solyc01g005560.2.1 [Go To ITAG tomato]
   Isocitrate dehydrogenase (D2D324_GOSHI)
chromosome/scaffold    chr01
GPL4741 Probe ID    Les.3311.3.S1_at;Les.3311.1.S1_at;Les.3311.2.S1_at
   Solyc01g005560.2.1   1248   n.t.(cDNA)
   415   a.a.(protein)
Pfam Accession Type Description Annotated transcript
   PF00180 [Go To pfam]
DomainIsocitrate/isopropylmalate dehydrogenase
KEGG ortholog ID Name Definition Annotated transcript
    [Go To KEGG]
   IDH1, IDH2, icd    isocitrate dehydrogenase [EC:]    101268602

     Mapping your query gene to KEGG pathways:

ID Description
map00020 Citrate cycle (TCA cycle) GO TO Pathway
map00480 Glutathione metabolism GO TO Pathway
map01100 Metabolic pathways GO TO Pathway
map01110 Biosynthesis of secondary metabolites GO TO Pathway
map01200 Carbon metabolism GO TO Pathway
map01210 2-Oxocarboxylic acid metabolism GO TO Pathway
map01230 Biosynthesis of amino acids GO TO Pathway
map04146 Peroxisome GO TO Pathway

     Gene Ontology:

GO category GO ID GO term
Biological process
GO:0055114 [Go To GO]    oxidation-reduction process
GO:0006099 [Go To GO]    tricarboxylic acid cycle
GO:0006102 [Go To GO]    isocitrate metabolic process
Molecular function
GO:0000287 [Go To GO]    magnesium ion binding
GO:0016491 [Go To GO]    oxidoreductase activity
GO:0016616 [Go To GO]    oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287 [Go To GO]    NAD binding
GO:0004450 [Go To GO]    isocitrate dehydrogenase (NADP+) activity
GO:0046872 [Go To GO]    metal ion binding

You can also search for microarray expression levels in specified conditions or start a co-expression analysis:

Contact us:Wen-Chi Chang          E-mail:sarah321@mail.ncku.edu.tw