Tanscript informations

ITAG Tomato ID    Solyc01g005540.2.1 [Go To ITAG tomato]
Description
   Lysyl-tRNA synthetase (B9SBP3_RICCO)
chromosome/scaffold    chr01
Sequence
   Solyc01g005540.2.1   1755   n.t.(cDNA)
   584   a.a.(protein)
Pfam Accession Type Description Annotated transcript
   PF00152 [Go To pfam]
   tRNA-synt_2
DomaintRNA synthetases class II (D, K and N)
   PF01336 [Go To pfam]
   tRNA_anti-codon
DomainOB-fold nucleic acid binding domain
KEGG ortholog ID Name Definition Annotated transcript
   K04567
    [Go To KEGG]
   KARS, lysS    lysyl-tRNA synthetase, class II [EC:6.1.1.6]    101243628


     Mapping your query gene to KEGG pathways:

ID Description
map00970 Aminoacyl-tRNA biosynthesis GO TO Pathway


     Gene Ontology:

GO category GO ID GO term
Biological process
GO:0006430 [Go To GO]    lysyl-tRNA aminoacylation
GO:0006418 [Go To GO]    tRNA aminoacylation for protein translation
Molecular function
GO:0005524 [Go To GO]    ATP binding
GO:0000166 [Go To GO]    nucleotide binding
GO:0004824 [Go To GO]    lysine-tRNA ligase activity
GO:0003676 [Go To GO]    nucleic acid binding
GO:0004812 [Go To GO]    aminoacyl-tRNA ligase activity
Cellular component
GO:0005737 [Go To GO]    cytoplasm


Contact us:Wen-Chi Chang          E-mail:sarah321@mail.ncku.edu.tw