Gene informations

TAIR ID    AT5G01530 [Go To TAIR]
HGNC symbol    LHCB4.1
Description    light harvesting complex photosystem II
Probe ID    251082_at [Go To GEO Profile]
Sequence
   AT5G01530.1   1222   n.t.(cDNA)
   290   a.a.(protein)
Pfam Accession Type Description
   PF00504 [Go To pfam]
   Family
Chlorophyll A-B binding protein
KEGG ortholog ID Name Definition
   K08915 [Go To KEGG]    LHCB4    light-harvesting complex II chlorophyll a/b binding protein 4


     Mapping your query gene to KEGG pathways:

ID Description
map00196 Photosynthesis - antenna proteins GO TO Pathway
map01100 Metabolic pathways GO TO Pathway


     Gene Ontology:

GO category GO ID GO term
Biological process
GO:0006091 [Go To GO]    generation of precursor metabolites and energy
GO:0006364 [Go To GO]    rRNA processing
GO:0006464 [Go To GO]    cellular protein modification process
GO:0008150 [Go To GO]    biological_process
GO:0009637 [Go To GO]    response to blue light
GO:0009644 [Go To GO]    response to high light intensity
GO:0009744 [Go To GO]    response to sucrose
GO:0009765 [Go To GO]    photosynthesis, light harvesting
GO:0010114 [Go To GO]    response to red light
GO:0010155 [Go To GO]    regulation of proton transport
GO:0010218 [Go To GO]    response to far red light
GO:0015979 [Go To GO]    photosynthesis
GO:0018298 [Go To GO]    protein-chromophore linkage
GO:0019684 [Go To GO]    photosynthesis, light reaction
GO:0034641 [Go To GO]    cellular nitrogen compound metabolic process
GO:0042254 [Go To GO]    ribosome biogenesis
Molecular function
GO:0003674 [Go To GO]    molecular_function
GO:0016168 [Go To GO]    chlorophyll binding
GO:0043167 [Go To GO]    ion binding
GO:0046872 [Go To GO]    metal ion binding
Cellular component
GO:0005575 [Go To GO]    cellular_component
GO:0005622 [Go To GO]    intracellular
GO:0005623 [Go To GO]    cell
GO:0005737 [Go To GO]    cytoplasm
GO:0009507 [Go To GO]    chloroplast
GO:0009522 [Go To GO]    photosystem I
GO:0009523 [Go To GO]    photosystem II
GO:0009534 [Go To GO]    chloroplast thylakoid
GO:0009535 [Go To GO]    chloroplast thylakoid membrane
GO:0009536 [Go To GO]    plastid
GO:0009579 [Go To GO]    thylakoid
GO:0010287 [Go To GO]    plastoglobule
GO:0016020 [Go To GO]    membrane
GO:0016021 [Go To GO]    integral component of membrane
GO:0043226 [Go To GO]    organelle
GO:0043234 [Go To GO]    protein complex


You can also search for microarray expression levels in specified conditions or start a co-expression analysis:


Contact us:Wen-Chi Chang          E-mail:sarah321@mail.ncku.edu.tw